STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTE1326Hypothetical protein. (200 aa)    
Predicted Functional Partners:
TTE1327
Conserved hypothetical protein; Best Blastp hit = gi|7475394|pir||H69991 hypothetical protein ytfJ - Bacillus subtilis gi|2293237|gb|AAC00315.1| (AF008220) YtfJ [Bacillus subtilis] gi|2635434|emb|CAB14928.1| (Z99119) ytfJ [Bacillus subtilis], score 150, E-value 1.00E-35.
  
    0.874
scpA
Conserved hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
       0.739
scpB
Predicted transcriptional regulator containing the HTH domain; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.
       0.739
SpoIVFB2
Zn-dependent protease; Best Blastp hit = gi|7430233|pir||G70459 conserved hypothetical protein aq_1853 - Aquifex aeolicus gi|2984137|gb|AAC07673.1| (AE000759) hypothetical protein [Aquifex aeolicus], score 159, E-value 2.00E-38.
       0.728
PcnB2
tRNA nucleotidyltransferase/poly(A) polymerase; Best Blastp hit = gi|7462978|pir||B72344 tRNA nucleotidyl transferase-related protein - Thermotoga maritima (strain MSB8) gi|4981239|gb|AAD35797.1|AE001742_12 (AE001742) tRNA nucleotidyl transferase-related protein [Thermotoga maritima], score 194, E-value 2.00E-48; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
       0.726
DacC3
D-alanyl-D-alanine carboxypeptidase; Best Blastp hit = gi|10174190|dbj|BAB05292.1| (AP001512) D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein) [Bacillus halodurans], score 235, E-value 6.00E-61; Belongs to the peptidase S11 family.
  
    0.702
UbiB3
2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases; Best Blastp hit = gi|4240004|dbj|BAA74788.1| (AB017192) electron transfer subunit protein [Clostridium perfringens], score 242, E-value 6.00E-63.
       0.538
TTE1320
Spore formation protein spoVAD; Best Blastp hit = gi|730785|sp|P40869|SP54_BACSU STAGE V SPORULATION PROTEIN AD gi|7475850|pir||G69714 spore formation protein spoVAD - Bacillus subtilis gi|1304004|dbj|BAA12659.1| (D84432) SpoVAD [Bacillus subtilis] gi|2634776|emb|CAB14273.1| (Z99116) mutants lead to the production of immature spores (stage V sporulation) [Bacillus subtilis], score 301, E-value 6.00E-81.
  
    0.406
Your Current Organism:
Caldanaerobacter subterraneus
NCBI taxonomy Id: 273068
Other names: C. subterraneus subsp. tengcongensis MB4, Caldanaerobacter subterraneus subsp. tengcongensis MB4, Thermoanaerobacter tengcongensis MB4, Thermoanaerobacter tengcongensis str. MB4, Thermoanaerobacter tengcongensis strain MB4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.