STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC-2ABC Transporter. (658 aa)    
Predicted Functional Partners:
msbA-1
Transport ATP-binding protein.
 
 
   0.941
msbA-2
Transport ATP-binding protein.
 
 
   0.939
UU510.1
Unique hypothetical.
       0.780
UU509
Conserved hypothetical ATP/GTP-binding protein.
 
     0.605
UU419
Conserved hypothetical.
  
     0.593
UU044
Unique hypothetical.
  
  
 0.583
ftsK
Cell division protein.
       0.513
UU547
Conserved hypothetical.
 
     0.500
UU565
Conserved hypothetical.
 
    0.478
Your Current Organism:
Ureaplasma parvum
NCBI taxonomy Id: 273119
Other names: U. parvum serovar 3 str. ATCC 700970, Ureaplasma parvum serovar 3 str. ATCC 700970, Ureaplasma parvum serovar 3 strain ATCC 700970, Ureaplasma urealyticum ATCC 700970
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.