STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WS0167Conserved hypothetical protein CJ0172C. (397 aa)    
Predicted Functional Partners:
WS0166
CARBOXYNORSPERMIDINE DECARBOXYLASE (NSPC); Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily.
 
  
 0.962
lysA
DIAMINOPIMELATE DECARBOXYLASE DAP DECARBOXYLASE; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
  
 
 0.916
WS0165
GLPM PROTEIN.
       0.773
ACRD
CATION EFFLUX ACRB/ACRD/ACRF FAMILY; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.655
WS0169
Hypothetical protein.
       0.655
rsmH
Conserved hypothetical protein CJ0693C; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
       0.655
POLA
DNA POLYMERASE I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.474
WS0171
MALIC ENZYME.
       0.435
Your Current Organism:
Wolinella succinogenes
NCBI taxonomy Id: 273121
Other names: W. succinogenes DSM 1740, Wolinella succinogenes DSM 1740
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