STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WS0192ABC TRANSPORTER, ATP-BINDING PROTEIN. (215 aa)    
Predicted Functional Partners:
RPSB
30S RIBOSOMAL PROTEIN S2; Belongs to the universal ribosomal protein uS2 family.
   
 
 0.828
TSF
ELONGATION FACTOR TS (EF-TS); Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.
     
 0.825
WS0191
FLAGELLAR BIOSYNTHETIC PROTEIN FLIR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.
       0.811
macB
PROBABLE TRANSMEMBRANE ATP-BINDING ABC TRANSPORTER PROTEIN; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP- binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
 
0.785
WS1259
Conserved hypothetical protein.
 
 0.721
WS1561
ABC TRANSPORT PERMEASE PROTEIN-Involved in lipoprotein release.
 
 0.664
lolA
Conserved hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
   
 
 0.642
RPSE
30S RIBOSOMAL PROTEIN S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family.
  
   
 0.614
WS1560
INTEGRAL MEMBRANE PROTEIN-Permease Component, involved in lipoprotein release.
 
 
 0.611
WS0861
CELL DIVISION CYCLE PROTEIN 48-RELATED PROTEIN; Belongs to the AAA ATPase family.
  
     0.609
Your Current Organism:
Wolinella succinogenes
NCBI taxonomy Id: 273121
Other names: W. succinogenes DSM 1740, Wolinella succinogenes DSM 1740
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.