Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FDXI | WS0574 | WS0579 | WS0574 | HYPOTHETICAL PROTEIN, WS0579. | Conserved hypothetical protein. | 0.533 |
FDXI | WS0575 | WS0579 | WS0575 | HYPOTHETICAL PROTEIN, WS0579. | MOTILITY PROTEIN. | 0.533 |
FDXI | fdhB-2 | WS0579 | WS0578 | HYPOTHETICAL PROTEIN, WS0579. | IRON-SULFUR PROTEIN PRECURSOR. | 0.997 |
WS0574 | FDXI | WS0574 | WS0579 | Conserved hypothetical protein. | HYPOTHETICAL PROTEIN, WS0579. | 0.533 |
WS0574 | WS0575 | WS0574 | WS0575 | Conserved hypothetical protein. | MOTILITY PROTEIN. | 0.870 |
WS0574 | fdhB-2 | WS0574 | WS0578 | Conserved hypothetical protein. | IRON-SULFUR PROTEIN PRECURSOR. | 0.533 |
WS0575 | FDXI | WS0575 | WS0579 | MOTILITY PROTEIN. | HYPOTHETICAL PROTEIN, WS0579. | 0.533 |
WS0575 | WS0574 | WS0575 | WS0574 | MOTILITY PROTEIN. | Conserved hypothetical protein. | 0.870 |
WS0575 | fdhB-2 | WS0575 | WS0578 | MOTILITY PROTEIN. | IRON-SULFUR PROTEIN PRECURSOR. | 0.533 |
fdhB-2 | FDXI | WS0578 | WS0579 | IRON-SULFUR PROTEIN PRECURSOR. | HYPOTHETICAL PROTEIN, WS0579. | 0.997 |
fdhB-2 | WS0574 | WS0578 | WS0574 | IRON-SULFUR PROTEIN PRECURSOR. | Conserved hypothetical protein. | 0.533 |
fdhB-2 | WS0575 | WS0578 | WS0575 | IRON-SULFUR PROTEIN PRECURSOR. | MOTILITY PROTEIN. | 0.533 |