Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CHEA | CHEA-2 | WS1080 | WS2083 | Hypothetical protein. | HISTIDINE KINASE. | 0.574 |
CHEA | CHEV | WS1080 | WS2084 | Hypothetical protein. | CHEMOTAXIS PROTEIN EC 2.7.3. | 0.969 |
CHEA | CHEV_1 | WS1080 | WS0257 | Hypothetical protein. | PUTATIVE CHEMOTAXIS PROTEIN. | 0.963 |
CHEA | CHEW | WS1080 | WS1078 | Hypothetical protein. | PUTATIVE CHEMOTAXIS PROTEIN CHEW. | 0.992 |
CHEA | WS0761 | WS1080 | WS0761 | Hypothetical protein. | METHYL-ACCEPTING CHEMOTAXIS PROTEIN MCP. | 0.776 |
CHEA | WS1213 | WS1080 | WS1213 | Hypothetical protein. | PROTEIN-GLUTAMATE METHYLESTERASE. | 0.990 |
CHEA | WS1869 | WS1080 | WS1869 | Hypothetical protein. | CHEMOTAXIS PROTEIN CHEV-CheY like receiver domain. | 0.968 |
CHEA | WS2082 | WS1080 | WS2082 | Hypothetical protein. | PURINE-BINDING CHEMOTAXIS PROTEIN CHEW. | 0.985 |
CHEA | cheR | WS1080 | WS1212 | Hypothetical protein. | RESPONSE REGULATOR FOR CHEMOTAXIS, PROTEIN GLUTAMATEMETHYLTRANSFERASE. | 0.935 |
CHEA-2 | CHEA | WS2083 | WS1080 | HISTIDINE KINASE. | Hypothetical protein. | 0.574 |
CHEA-2 | CHEV | WS2083 | WS2084 | HISTIDINE KINASE. | CHEMOTAXIS PROTEIN EC 2.7.3. | 0.999 |
CHEA-2 | CHEV_1 | WS2083 | WS0257 | HISTIDINE KINASE. | PUTATIVE CHEMOTAXIS PROTEIN. | 0.999 |
CHEA-2 | CHEW | WS2083 | WS1078 | HISTIDINE KINASE. | PUTATIVE CHEMOTAXIS PROTEIN CHEW. | 0.999 |
CHEA-2 | WS0761 | WS2083 | WS0761 | HISTIDINE KINASE. | METHYL-ACCEPTING CHEMOTAXIS PROTEIN MCP. | 0.958 |
CHEA-2 | WS1213 | WS2083 | WS1213 | HISTIDINE KINASE. | PROTEIN-GLUTAMATE METHYLESTERASE. | 0.999 |
CHEA-2 | WS1869 | WS2083 | WS1869 | HISTIDINE KINASE. | CHEMOTAXIS PROTEIN CHEV-CheY like receiver domain. | 0.999 |
CHEA-2 | WS2082 | WS2083 | WS2082 | HISTIDINE KINASE. | PURINE-BINDING CHEMOTAXIS PROTEIN CHEW. | 0.999 |
CHEA-2 | cheR | WS2083 | WS1212 | HISTIDINE KINASE. | RESPONSE REGULATOR FOR CHEMOTAXIS, PROTEIN GLUTAMATEMETHYLTRANSFERASE. | 0.962 |
CHEV | CHEA | WS2084 | WS1080 | CHEMOTAXIS PROTEIN EC 2.7.3. | Hypothetical protein. | 0.969 |
CHEV | CHEA-2 | WS2084 | WS2083 | CHEMOTAXIS PROTEIN EC 2.7.3. | HISTIDINE KINASE. | 0.999 |
page 1 of 5