STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PEX2_077980Ribosomal protein Rsm22, bacterial-type. (829 aa)    
Predicted Functional Partners:
PEX2_087780
Ribosomal protein S5, C-terminal; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.958
PEX2_076030
Ribosomal protein S23/S29, mitochondrial.
   
 
 0.945
PEX2_026570
S15/NS1, RNA-binding; Belongs to the universal ribosomal protein uS15 family.
   
 
 0.943
PEX2_099360
Ribosomal protein S2, bacteria/mitochondria/plastid.
   
 
 0.934
PEX2_105230
MRP-S28 domain-containing protein.
    
 
 0.922
PEX2_053180
Nucleic acid-binding, OB-fold.
   
 
 0.915
PEX2_072880
Ribosomal protein S16.
   
 
 0.913
PEX2_107700
Nucleic acid-binding, OB-fold.
   
   0.911
PEX2_034020
Ribosomal protein S27/S33, mitochondrial.
    
 
 0.909
PEX2_031380
Ribosomal protein S10.
    
 
 0.907
Your Current Organism:
Penicillium expansum
NCBI taxonomy Id: 27334
Other names: ATCC 7861, CBS 325.48, P. expansum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.