STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_773g7Protein transport protein SFT2; Nonessential protein required for the fusion of transport vesicles derived from the endocytic pathway with the Golgi complex. Belongs to the SFT2 family. (344 aa)    
Predicted Functional Partners:
VP01_892g7
Syntaxin 5; Belongs to the syntaxin family.
    
 
 0.812
VP01_142g17
Uncharacterized protein.
   
 
 0.784
VP01_44g6
GRIP domain-containing protein.
    
   0.674
VP01_3527g1
Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.
    
   0.656
VP01_797g1
Synaptobrevin YKT6; Belongs to the synaptobrevin family.
    
 
 0.584
VP01_924g2
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
   0.542
VP01_59g7
Rab family protein.
    
 
 0.483
VP01_579g3
Golgi SNAP receptor complex member 1.
   
 
 0.437
VP01_463g15
t-SNARE coiled-coil homology domain-containing protein.
    
   0.430
VP01_2248g2
Vesicle transporter SEC22; Belongs to the synaptobrevin family.
    
 
 0.407
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.