STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_630g2Protein kinase domain-containing protein. (568 aa)    
Predicted Functional Partners:
VP01_662g9
Uncharacterized protein.
   
 0.981
VP01_978g1
DNA helicase; Belongs to the MCM family.
   
 0.980
VP01_2222g3
DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.
   
 0.973
VP01_2483g3
BRCT domain-containing protein.
    
 
 0.954
VP01_737g3
WEE protein kinase, variant.
   
 0.951
VP01_857g2
Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
   
 
 0.945
VP01_98g1
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.942
VP01_589g1
Uncharacterized protein.
    
 0.942
VP01_4250g2
Uncharacterized protein.
    
 0.942
VP01_1625g12
Uncharacterized protein.
    
 0.942
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.