STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_410g1240S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (105 aa)    
Predicted Functional Partners:
VP01_889g8
40S ribosomal protein S18.
   
 0.999
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.999
VP01_915g15
Ribosomal protein S23 (S12); Belongs to the universal ribosomal protein uS12 family.
   
 0.999
rpsE
Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
   
 0.999
VP01_839g5
Small subunit ribosomal protein S24e.
   
 0.999
rpsG
Ribosomal protein S7; Belongs to the universal ribosomal protein uS7 family.
   
 0.999
rpsC
Ribosomal protein S3.
   
 0.999
VP01_5168g1
60S ribosomal protein L33-B.
   
 
 0.999
VP01_463g17
Ribosomal_L18_c domain-containing protein.
   
 
 0.999
VP01_418g5
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
   
 0.999
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.