STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_4055g2Uncharacterized protein. (371 aa)    
Predicted Functional Partners:
VP01_1006g2
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
  0.810
VP01_379g7
AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.
    
  0.761
VP01_1662g1
NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex 8.
    
  0.707
VP01_2491g4
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
   0.615
VP01_65g15
Uncharacterized protein.
    
   0.600
VP01_5902g1
Uncharacterized protein.
    
   0.600
VP01_4894g1
Uncharacterized protein.
    
   0.600
VP01_451g2
NADH dehydrogenase.
    
   0.600
VP01_172g13
Uncharacterized protein.
    
   0.600
VP01_1906g3
PLK/PLK1 protein kinase.
    
  0.597
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
Server load: low (18%) [HD]