VP01_3879g1 protein (Puccinia sorghi) - STRING interaction network

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Score

VP01_3879g1

XRN1_D1 domain-containing protein. (94 aa)

Predicted Functional Partners:

VP01_3240g1

0.870

VP01_2023g2

0.763

LSM1

0.733

VP01_2100g1

0.732

LSM3

0.731

VP01_1484g1

0.727

VP01_2217g5

0.712

VP01_169g11

0.712

VP01_2840g1

0.690

VP01_2160g3

0.672

Your Current Organism:

Puccinia sorghi

NCBI taxonomy Id: 27349
Other names: P. sorghi

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LSM1	LSM3	A0A0L6V7R5	A0A0L6VJM3	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
LSM1	VP01_169g11	A0A0L6V7R5	A0A0L6VGB1	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	Uncharacterized protein.	0.936
LSM1	VP01_2100g1	A0A0L6V7R5	A0A0L6VAD7	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	Uncharacterized protein.	0.999
LSM1	VP01_2217g5	A0A0L6V7R5	A0A0L6V8Z9	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	Nudix hydrolase domain-containing protein.	0.936
LSM1	VP01_3240g1	A0A0L6V7R5	A0A0L6UY19	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	Uncharacterized protein.	0.880
LSM1	VP01_3879g1	A0A0L6V7R5	A0A0L6USV9	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	XRN1_D1 domain-containing protein.	0.733
LSM3	LSM1	A0A0L6VJM3	A0A0L6V7R5	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	0.999
LSM3	VP01_169g11	A0A0L6VJM3	A0A0L6VGB1	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.887
LSM3	VP01_2100g1	A0A0L6VJM3	A0A0L6VAD7	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.999
LSM3	VP01_2217g5	A0A0L6VJM3	A0A0L6V8Z9	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Nudix hydrolase domain-containing protein.	0.887
LSM3	VP01_3240g1	A0A0L6VJM3	A0A0L6UY19	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.846
LSM3	VP01_3879g1	A0A0L6VJM3	A0A0L6USV9	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	XRN1_D1 domain-containing protein.	0.731
VP01_1484g1	VP01_169g11	A0A0L6VK32	A0A0L6VGB1	Uncharacterized protein.	Uncharacterized protein.	0.799
VP01_1484g1	VP01_2217g5	A0A0L6VK32	A0A0L6V8Z9	Uncharacterized protein.	Nudix hydrolase domain-containing protein.	0.799
VP01_1484g1	VP01_3240g1	A0A0L6VK32	A0A0L6UY19	Uncharacterized protein.	Uncharacterized protein.	0.820
VP01_1484g1	VP01_3879g1	A0A0L6VK32	A0A0L6USV9	Uncharacterized protein.	XRN1_D1 domain-containing protein.	0.727
VP01_169g11	LSM1	A0A0L6VGB1	A0A0L6V7R5	Uncharacterized protein.	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	0.936
VP01_169g11	LSM3	A0A0L6VGB1	A0A0L6VJM3	Uncharacterized protein.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.887
VP01_169g11	VP01_1484g1	A0A0L6VGB1	A0A0L6VK32	Uncharacterized protein.	Uncharacterized protein.	0.799
VP01_169g11	VP01_2100g1	A0A0L6VGB1	A0A0L6VAD7	Uncharacterized protein.	Uncharacterized protein.	0.973