STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mvaDDiphosphomevalonate decarboxylase. (454 aa)    
Predicted Functional Partners:
VP01_848g2
Isopentenyl-diphosphate Delta-isomerase.
  
 
 0.986
VP01_1030g8
Farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 0.986
VP01_9g14
Geranylgeranyl diphosphate synthase, type III; Belongs to the FPP/GGPP synthase family.
  
 0.972
VP01_103g1
GHMP_kinases_N domain-containing protein.
  
 
 0.959
VP01_218g18
L-lactate dehydrogenase (Cytochrome); Belongs to the cytochrome b5 family.
  
 
 0.922
VP01_453g21
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
  
 0.920
VP01_93g2
3-hydroxy-3-methylglutaryl coenzyme A reductase.
  
 
 0.897
VP01_2899g1
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.
 
 
 0.891
VP01_242g8
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
   
 
 0.860
VP01_3324g3
Uncharacterized protein.
    
 0.841
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.