STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_3065g1Uncharacterized protein. (774 aa)    
Predicted Functional Partners:
VP01_683g3
Uncharacterized protein.
   
 0.999
VP01_356g7
Exocyst complex component SEC5; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.
    
 0.999
VP01_3021g1
Exocyst complex protein EXO70; Involved in the secretory pathway as part of the exocyst complex which tethers secretory vesicles to the sites of exocytosis. Also plays a role in the assembly of the exocyst. Belongs to the EXO70 family.
   
 0.999
VP01_231g4
Uncharacterized protein.
   
 0.999
VP01_1264g1
Uncharacterized protein.
    
 0.999
VP01_665g3
Exo84_C domain-containing protein.
    
 0.984
VP01_709g3
Uncharacterized protein.
    
 0.976
VP01_502g3
F-box domain-containing protein.
   
 0.968
VP01_4350g2
Ras-like protein Rab-8A.
    
 0.916
VP01_1202g3
Uncharacterized protein.
    
 0.916
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
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