STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_2997g4Uncharacterized protein. (184 aa)    
Predicted Functional Partners:
VP01_2997g5
Cation_ATPase_N domain-containing protein.
 
     0.949
VP01_7820g1
Uncharacterized protein.
 
     0.920
VP01_14952g1
Uncharacterized protein.
 
      0.900
VP01_4082g3
Plasma-membrane proton-efflux P-type ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family.
 
      0.899
VP01_13138g1
Uncharacterized protein.
 
      0.898
VP01_2813g5
Uncharacterized protein.
 
      0.891
VP01_59g5
Uncharacterized protein; Belongs to the CDC50/LEM3 family.
    
 0.740
VP01_475g11
Uncharacterized protein.
   
 0.668
atpD
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 0.615
VP01_1080g15
V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.
    
 0.612
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
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