STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_2986g7Arf-GAP domain-containing protein. (441 aa)    
Predicted Functional Partners:
VP01_432g16
Arf-GAP domain-containing protein.
    
0.874
VP01_2605g4
Arf-GAP domain-containing protein.
    
0.790
VP01_914g1
SH3 domain-containing protein.
    
 0.661
VP01_587g4
Exodeoxyribonuclease V; Belongs to the OSBP family.
    
 
 0.610
VP01_1240g5
Exodeoxyribonuclease V.
    
 
 0.610
VP01_3553g2
Arf-GAP domain-containing protein.
     
0.584
VP01_2012g3
Arf-GAP domain-containing protein.
  
  
 
0.539
VP01_435g9
ENTH domain-containing protein.
    
 0.511
VP01_293g8
Uncharacterized protein.
    
 0.511
VP01_293g7
ENTH domain-containing protein.
    
 0.511
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.