STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_279g1Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c. (317 aa)    
Predicted Functional Partners:
cyoE
Protoheme IX farnesyltransferase.
   
 
 0.954
VP01_1618g1
Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.
  
 
0.938
VP01_9797g1
Ferrochelatase.
     
 0.795
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
     
 0.795
VP01_713g6
Ferrochelatase; Belongs to the ferrochelatase family.
     
 0.795
VP01_49g8
Ferrochelatase.
     
 0.795
VP01_2176g5
Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
   
 
 0.566
VP01_1135g5
Ubiquinol-cytochrome c reductase cytochrome c1 subunit.
   
 
 0.560
VP01_663g1
Uncharacterized protein.
   
 
 0.551
VP01_663g17
Uncharacterized protein.
   
 
 0.551
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.