STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_26g15MIF4G domain-containing protein. (764 aa)    
Predicted Functional Partners:
VP01_320g5
Uncharacterized protein.
   
 0.895
VP01_1804g4
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
   
 0.894
VP01_2358g1
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 0.860
VP01_1192g1
Uncharacterized protein.
   
 0.860
VP01_819g2
Uncharacterized protein.
   
 0.859
VP01_762g6
Nuclear cap-binding protein subunit 2.
    
 0.827
VP01_2134g3
Uncharacterized protein.
   
 
 0.817
VP01_510g1
Uncharacterized protein.
   
 0.789
VP01_276g17
Uncharacterized protein.
    
 0.786
VP01_1077g11
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
    
 0.786
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.