STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_183g5Uncharacterized protein. (185 aa)    
Predicted Functional Partners:
VP01_3345g1
Uncharacterized protein.
   
 0.982
VP01_1253g5
Uncharacterized protein.
   
 
 0.977
VP01_643g3
Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.
   
 0.956
VP01_2650g4
NADH-ubiquinone oxidoreductase 49 kDa subunit, mitochondrial; Belongs to the complex I 49 kDa subunit family.
   
 
 0.950
VP01_3585g4
Uncharacterized protein.
   
 0.945
VP01_2711g2
Uncharacterized protein.
   
   0.939
VP01_1662g1
NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex 8.
   
 
 0.936
VP01_1280g2
Uncharacterized protein.
   
 0.929
VP01_1125g5
NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex 6.
   
 
 0.922
VP01_4820g1
Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.
   
  
 0.920
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
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