STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_1368g5PIPK domain-containing protein. (578 aa)    
Predicted Functional Partners:
VP01_2173g3
Protein translocase SEC61 complex gamma subunit, archaeal and eukaryotic.
   
 0.990
VP01_271g2
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 0.930
VP01_805g3
Phosphoinositide phospholipase C.
    
 0.923
VP01_2390g4
RBR-type E3 ubiquitin transferase.
 
  
   0.908
VP01_1345g2
SAC domain-containing protein.
    
 0.904
VP01_1792g10
SAC domain-containing protein.
    
 0.898
VP01_253g6
PI3K/PI4K domain-containing protein.
     
 0.888
VP01_2287g1
Uncharacterized protein.
   
 0.869
VP01_2287g3
Atypical/PI4K protein kinase; Belongs to the PI3/PI4-kinase family.
   
 0.869
VP01_2g13
SRP54 domain-containing protein.
    
 0.860
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.