STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_1350g3J domain-containing protein. (663 aa)    
Predicted Functional Partners:
VP01_209g4
Uncharacterized protein.
   
 0.983
secY
Preprotein translocase, SecY subunit.
   
 
 0.937
VP01_163g6
Uncharacterized protein.
    
 
 0.931
VP01_1719g4
Uncharacterized protein.
    
 
 0.931
VP01_2173g3
Protein translocase SEC61 complex gamma subunit, archaeal and eukaryotic.
    
 
 0.902
VP01_1507g4
Glucose-regulated protein; Belongs to the heat shock protein 70 family.
  
 
 0.849
VP01_682g8
STE/STE20/FRAY protein kinase.
    
 
 0.837
VP01_47g5
Uncharacterized protein.
     
 0.708
VP01_2148g3
Uncharacterized protein.
  
 
 0.657
VP01_837g2
Uncharacterized protein.
     
 0.553
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.