STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_1177g4Uncharacterized protein. (238 aa)    
Predicted Functional Partners:
VP01_3777g1
CAMK/CAMK1 protein kinase.
 
 
0.956
VP01_1119g2
Uncharacterized protein.
 
 
 0.947
VP01_256g5
Ras family protein.
    
 0.906
VP01_1694g10
Uncharacterized protein.
    
 0.906
VP01_1171g2
Lysophospholipase NTE1; Intracellular phospholipase B that catalyzes the double deacylation of phosphatidylcholine (PC) to glycerophosphocholine (GroPCho). Plays an important role in membrane lipid homeostasis.
   
 0.902
VP01_197g6
Uncharacterized protein.
    
 0.894
VP01_53g3
Uncharacterized protein.
   
 0.848
VP01_317g5
HTH APSES-type domain-containing protein.
    
 0.833
VP01_78g5
AGC protein kinase.
    
 
0.827
VP01_1651g4
AGC protein kinase.
    
  0.827
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.