STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP01_1060g1Abhydrolase_3 domain-containing protein. (957 aa)    
Predicted Functional Partners:
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.913
nuoG
NADH dehydrogenase (Quinone), G subunit; Belongs to the complex I 75 kDa subunit family.
    
 0.907
nuoF
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
    
 0.900
VP01_763g7
NADH dehydrogenase (Ubiquinone) flavoprotein 2.
    
  0.898
petA
Ubiquinol-cytochrome c reductase, iron-sulfur subunit.
   
 0.844
VP01_1135g5
Ubiquinol-cytochrome c reductase cytochrome c1 subunit.
    
 0.839
kynU
Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively; Belongs to the kynureninase family.
  
 
 0.823
VP01_1732g1
AMP-binding domain-containing protein.
  
 0.817
VP01_291g4
NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex 9.
  
 
 0.816
VP01_1436g6
Mitochondrial-processing peptidase subunit beta.
    
 
 0.802
Your Current Organism:
Puccinia sorghi
NCBI taxonomy Id: 27349
Other names: P. sorghi
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.