STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MG2_1477Transcription initiation factor TFIID, TATA-box-binding protein. (214 aa)    
Predicted Functional Partners:
MG2_0881
Putative DNA-directed RNA polymerase, subunit H, RpoH/RPB5.
    
 0.999
MG2_1387
50S ribosomal protein L40e.
    
 0.999
MG2_0264
DNA-directed RNA polymerase subunit N.
  
 
 0.997
MG2_0591
DNA-directed RNA polymerase subunit K.
    
 0.996
MG2_0131
DNA-directed RNA polymerase subunit D.
   
 0.995
MG2_0882
DNA-directed RNA polymerase subunit B.
  
 
 0.994
MG2_0847
ERCC2/XPD/Rad3-related DNA repair helicase.
 
 
 0.993
MG2_1235
DNA-directed RNA polymerase subunit E.
  
 
 0.992
MG2_1517
DNA-directed RNA polymerase, subunit M; Transcription elongation factor TFIIS.
   
 0.991
MG2_0083
Transcription initiation factor TFIIB.
  
 0.977
Your Current Organism:
uncultured Poseidoniales archaeon
NCBI taxonomy Id: 274854
Other names: u. Candidatus Poseidoniales archaeon, uncultured Candidatus Poseidoniales archaeon, uncultured marine group II euryarchaeote
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.