STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EH55_11435Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (536 aa)    
Predicted Functional Partners:
EH55_13200
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.909
EH55_11030
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.897
EH55_03755
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.677
EH55_13190
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.665
EH55_11425
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.615
EH55_11430
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.615
EH55_12955
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.599
EH55_13220
Tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.574
EH55_13270
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.574
EH55_12965
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
   0.570
Your Current Organism:
Synergistes jonesii
NCBI taxonomy Id: 2754
Other names: ATCC 49833, S. jonesii, strain 78-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.