STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000002626annotation not available (133 aa)    
Predicted Functional Partners:
spcs1
Signal peptidase complex subunit 1.
   
 0.894
spcs3
Signal peptidase complex subunit 3.
   
 0.891
immp1l
Inner mitochondrial membrane peptidase subunit 1.
    
0.871
kptn
Kaptin, actin binding protein.
    
 0.859
ENSECRP00000008174
annotation not available
   
 0.853
ENSECRP00000008202
annotation not available
   
 0.853
depdc5
DEP domain containing 5, GATOR1 subcomplex subunit.
    
 0.825
wdr24
WD repeat domain 24.
    
 0.805
wdr59
WD repeat domain 59.
    
 0.803
nprl2
NPR2 like, GATOR1 complex subunit.
    
 0.785
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.