STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000003788annotation not available (521 aa)    
Predicted Functional Partners:
fancm
FA complementation group M.
    
 0.974
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
  0.943
med14
Mediator complex subunit 14.
    
 0.893
med17
Mediator complex subunit 17.
    
 0.870
med7
Mediator complex subunit 7.
    
  0.853
ENSECRP00000009357
annotation not available
    
 0.838
med31
Mediator complex subunit 31.
    
 0.835
med10
Mediator complex subunit 10.
    
 0.835
ccnc
Cyclin C.
    
 0.822
med6
Mediator complex subunit 6.
    
 0.806
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.