STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114650969Complement factor B-like. (774 aa)    
Predicted Functional Partners:
LOC114647755
Mannose-binding protein C-like.
   
 0.857
ENSECRP00000005269
annotation not available
   
 0.848
LOC114656898
Complement C1q subcomponent subunit B-like.
   
 0.844
c4b
Complement C4B (Chido blood group).
   
 0.841
LOC114667458
Complement C3-like.
   
 0.841
c3
Complement C3.
   
 0.841
ENSECRP00000027798
annotation not available
   
 0.841
LOC114658913
Complement factor H-like.
    
 0.833
LOC114656897
Complement C1q subcomponent subunit C-like.
   
 
 0.832
c5
Complement C5.
   
 0.814
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.