STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccdc166Coiled-coil domain containing 166. (271 aa)    
Predicted Functional Partners:
fpgs
Folylpolyglutamate synthase.
     
 0.794
tyms
Thymidylate synthetase.
   
 
 0.757
dhfr
Dihydrofolate reductase.
     
 0.709
LOC114662478
Dihydrofolate reductase-like.
     
 0.664
pold1
DNA polymerase delta 1, catalytic subunit.
     
 0.635
LOC114647339
Ubiquitin-conjugating enzyme E2 variant 3-like.
      
 0.607
gstz1
Glutathione S-transferase zeta 1.
     
 0.538
gart
annotation not available
   
  
 0.444
eef1g
Eukaryotic translation elongation factor 1 gamma.
     
 0.400
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.