STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114642918Transcription cofactor HES-6-like. (213 aa)    
Predicted Functional Partners:
ENSECRP00000030430
annotation not available
    
 0.916
fancl
FA complementation group L.
    
 0.916
fancg
FA complementation group G.
    
 0.915
fancc
FA complementation group C.
    
  0.914
rpl10a
Ribosomal protein L10a.
    
  0.824
fance
FA complementation group E.
    
  0.824
LOC114646266
Transcription cofactor HES-6-like.
    
0.792
nutf2
Nuclear transport factor 2.
    
  0.790
fanca
FA complementation group A.
    
  0.790
LOC114663448
Nuclear transport factor 2-like.
    
  0.790
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.