STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alg11ALG11 alpha-1,2-mannosyltransferase. (485 aa)    
Predicted Functional Partners:
alg3
ALG3 alpha-1,3- mannosyltransferase.
    
 0.949
alg2
ALG2 alpha-1,3/1,6-mannosyltransferase.
   
0.907
gbe1
1,4-alpha-glucan branching enzyme 1.
  
 0.898
ENSECRP00000004184
annotation not available
  
 0.895
tgds
TDP-glucose 4,6-dehydratase.
  
 
 0.888
dpm1
Dolichyl-phosphate mannosyltransferase subunit 1, catalytic.
  
 
 0.854
alg5
ALG5 dolichyl-phosphate beta-glucosyltransferase.
  
 
 0.853
dpm2
Dolichyl-phosphate mannosyltransferase subunit 2, regulatory.
    
 0.850
dolk
Dolichol kinase.
     
 0.835
alg14
ALG14 UDP-N-acetylglucosaminyltransferase subunit.
     
 0.834
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.