STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cmtm3CKLF like MARVEL transmembrane domain containing 3. (169 aa)    
Predicted Functional Partners:
cmtm4
CKLF like MARVEL transmembrane domain containing 4.
      
0.565
cklf
Chemokine like factor.
      
0.564
cmtm7
CKLF like MARVEL transmembrane domain containing 7.
      
 0.558
nsa2
NSA2 ribosome biogenesis factor.
      
 0.554
cmtm8
CKLF like MARVEL transmembrane domain containing 8.
      
 0.514
bean1
Brain expressed associated with NEDD4 1.
      
 0.506
sf3b3
Splicing factor 3b subunit 3.
      
 0.482
prrg1
Proline rich and Gla domain 1.
      
 0.428
rbm46
RNA binding motif protein 46.
      
 0.424
kynu
Kynureninase.
      
 0.418
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.