STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mcuMitochondrial calcium uniporter. (368 aa)    
Predicted Functional Partners:
micu1
Mitochondrial calcium uptake 1.
    
 0.976
ENSECRP00000012778
annotation not available
    
 0.965
ENSECRP00000012383
annotation not available
    
 0.956
smdt1
Single-pass membrane protein with aspartate rich tail 1.
    
 0.956
micu3
Mitochondrial calcium uptake family member 3.
     
 0.868
phb2
Prohibitin 2.
     
 0.719
spg7
SPG7 matrix AAA peptidase subunit, paraplegin.
     
 0.693
phb
Prohibitin.
     
 0.665
afg3l2
AFG3 like matrix AAA peptidase subunit 2.
     
 0.649
LOC114657893
AFG3-like protein 1.
     
 0.649
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.