STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114663419Disintegrin and metalloproteinase domain-containing protein 22-like. (909 aa)    
Predicted Functional Partners:
lgi2
Leucine rich repeat LGI family member 2.
     
 0.725
lgi1
Leucine rich glioma inactivated 1.
     
 0.655
adam23
ADAM metallopeptidase domain 23.
  
 
0.646
lgi3
Leucine rich repeat LGI family member 3.
     
 0.629
ENSECRP00000012066
annotation not available
    
 0.590
ENSECRP00000012442
annotation not available
    
 0.590
ENSECRP00000012504
annotation not available
    
 0.590
dlg4
Discs large MAGUK scaffold protein 4.
    
 0.590
dlg3
Discs large MAGUK scaffold protein 3.
    
 0.590
ENSECRP00000026450
annotation not available
    
 0.590
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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