STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
foxd1Forkhead box D1. (331 aa)    
Predicted Functional Partners:
ENSECRP00000019819
annotation not available
     
 0.690
LOC114653337
Serine/threonine-protein kinase Sgk3.
    
 0.684
sirt1
Sirtuin 1.
    
 0.579
akt2
AKT serine/threonine kinase 2.
    
 0.577
ENSECRP00000010522
annotation not available
    
 0.577
akt3
AKT serine/threonine kinase 3.
    
 0.577
crebbp
CREB binding protein.
    
 0.572
ep300
E1A binding protein p300.
    
 0.572
ENSECRP00000027503
annotation not available
    
 0.572
cenpp
Centromere protein P.
    
 0.572
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.