STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plcb4Phospholipase C beta 4. (1227 aa)    
Predicted Functional Partners:
LOC114662752
Guanine nucleotide-binding protein subunit alpha-11.
    
 0.930
LOC114652196
Guanine nucleotide-binding protein G(q) subunit alpha.
    
 0.928
LOC114652197
Guanine nucleotide-binding protein subunit alpha-14-like.
    
 0.926
LOC114662751
Guanine nucleotide-binding protein subunit alpha-11-like.
    
 0.917
itpr2
Inositol 1,4,5-trisphosphate receptor type 2.
    
 0.888
LOC114659384
Guanine nucleotide-binding protein G(i) subunit alpha-1.
   
 0.886
gnai3
G protein subunit alpha i3.
   
 0.883
dgkq
Diacylglycerol kinase theta.
     
 0.878
gnao1
G protein subunit alpha o1.
   
 0.873
gnai2
G protein subunit alpha i2.
   
 0.873
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.