STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
psmd9Proteasome 26S subunit, non-ATPase 9. (204 aa)    
Predicted Functional Partners:
psmc6
Proteasome 26S subunit, ATPase 6.
    
 0.999
psmc3
Proteasome 26S subunit, ATPase 3.
    
 0.999
psmc4
Proteasome 26S subunit, ATPase 4.
   
 0.997
psmc5
Proteasome 26S subunit, ATPase 5.
   
 0.997
psmd1
Proteasome 26S subunit, non-ATPase 1.
    
 0.994
psmd10
Proteasome 26S subunit, non-ATPase 10.
  
 0.993
psmd12
Proteasome 26S subunit, non-ATPase 12.
    
 0.993
psmc2
Proteasome 26S subunit, ATPase 2.
   
 0.991
ENSECRP00000009890
annotation not available
   
 0.990
psmd2
Proteasome 26S subunit, non-ATPase 2.
    
 0.989
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.