STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7Q130_CHOCRIntegrase catalytic domain-containing protein. (198 aa)    
Predicted Functional Partners:
R7QU26_CHOCR
Integrase catalytic domain-containing protein.
  
     0.491
R7QRD9_CHOCR
Retrotransposon protein.
  
     0.485
R7QGU1_CHOCR
RT_RNaseH_2 domain-containing protein.
  
     0.483
R7QUC1_CHOCR
Uncharacterized protein.
  
     0.478
R7Q8B2_CHOCR
RT_RNaseH domain-containing protein.
  
     0.468
R7QRS9_CHOCR
RT_RNaseH_2 domain-containing protein.
  
     0.467
R7Q9P3_CHOCR
RT_RNaseH_2 domain-containing protein.
  
     0.463
R7Q743_CHOCR
Integrase catalytic domain-containing protein.
  
     0.461
R7QQA4_CHOCR
RT_RNaseH domain-containing protein.
  
     0.455
R7QIW2_CHOCR
Reverse transcriptase domain-containing protein.
  
     0.454
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
Server load: low (22%) [HD]