STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7Q3C6_CHOCRUncharacterized protein. (1020 aa)    
Predicted Functional Partners:
R7QKX3_CHOCR
SWIB domain-containing proteincomplex.
    
 0.958
R7QN59_CHOCR
ARPC5; Belongs to the actin family.
    
 0.957
R7Q3S0_CHOCR
ARID domain-containing protein.
   
 0.920
R7QG43_CHOCR
Uncharacterized protein.
   
 0.880
R7QTW3_CHOCR
Uncharacterized protein.
   
 0.880
R7Q4P5_CHOCR
Probable histone acetyltransferase GCN5.
    
 0.720
R7QT48_CHOCR
Uncharacterized protein.
    
 0.717
R7QDF0_CHOCR
Uncharacterized protein.
    
 0.716
R7QH36_CHOCR
Uncharacterized protein.
    
 0.716
R7QMN1_CHOCR
Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.
    
  0.681
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.