STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7Q430_CHOCRDUF1989 domain-containing protein. (296 aa)    
Predicted Functional Partners:
R7QI51_CHOCR
Glycerophosphoryl diester phosphodiesterase.
    
 0.634
R7QEH3_CHOCR
Uncharacterized protein.
    
 0.604
R7QJQ6_CHOCR
Uncharacterized protein.
    
 0.604
R7QMR6_CHOCR
Uncharacterized protein.
    
 0.604
R7QNE6_CHOCR
Uncharacterized protein.
    
 0.604
R7QNN9_CHOCR
Uncharacterized protein.
    
 0.604
R7Q3P4_CHOCR
Uncharacterized protein.
    
 0.574
R7QJB2_CHOCR
Calmodulin; Belongs to the calmodulin family.
    
 0.574
R7Q4P7_CHOCR
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
   
  0.510
R7QD08_CHOCR
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.497
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
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