STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7Q4P7_CHOCRUncharacterized protein; Belongs to the universal ribosomal protein uS11 family. (148 aa)    
Predicted Functional Partners:
R7Q390_CHOCR
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
 0.999
R7Q3M5_CHOCR
Uncharacterized protein.
   
 0.999
R7Q4Z1_CHOCR
40S ribosomal protein S11.
  
 0.999
R7Q697_CHOCR
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.999
R7Q6M6_CHOCR
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
  
 0.999
R7Q7A5_CHOCR
S10_plectin domain-containing protein.
   
 0.999
R7Q7L5_CHOCR
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.999
R7Q8F1_CHOCR
Uncharacterized protein.
  
 0.999
R7Q8R5_CHOCR
Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.
  
 0.999
R7QAG8_CHOCR
40S ribosomal protein S29.
  
 0.999
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.