STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7QAH4_CHOCRUncharacterized protein. (328 aa)    
Predicted Functional Partners:
R7QQB4_CHOCR
6-phosphogluconate dehydrogenase, decarboxylating; Belongs to the 6-phosphogluconate dehydrogenase family.
     
 0.465
upp
Uracil phosphoribosyltransferase or UMP pyrophosphorylase.
  
 
  0.435
R7QCX4_CHOCR
PRK domain-containing protein.
  
 
  0.435
R7QGF6_CHOCR
Phosphoribulokinase.
  
 
  0.435
R7QLP0_CHOCR
Uncharacterized protein.
  
 
  0.435
R7QE57_CHOCR
Chloroplast 3-oxoacyl-[acyl-carrier protein] reductase orecursor.
 
 
 0.414
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.