STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7QB51_CHOCRUncharacterized protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Era GTPase family. (376 aa)    
Predicted Functional Partners:
rps14
30S ribosomal protein S14.
    
 0.828
rps12
30S ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.
    
 0.819
R7Q7S1_CHOCR
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
 0.803
rps7
Ribosomal protein S7; Belongs to the universal ribosomal protein uS7 family.
    
 0.796
R7Q4U9_CHOCR
Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.
    
 0.796
rps2
30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.
  
 0.793
R7QKX9_CHOCR
30S ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.
   
 0.793
R7QP79_CHOCR
30S ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.
   
 0.793
rps9
30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
  
 0.790
R7Q7R1_CHOCR
Ribosomal protein S9 family protein; Belongs to the universal ribosomal protein uS9 family.
  
 0.790
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
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