STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7QBR8_CHOCRULP_PROTEASE domain-containing protein. (276 aa)    
Predicted Functional Partners:
R7QIH4_CHOCR
Rad60-SLD domain-containing protein.
   
 0.738
R7QUS6_CHOCR
Uncharacterized protein.
   
 0.738
R7QQU3_CHOCR
Importin subunit alpha; Belongs to the importin alpha family.
    
 
 0.718
R7QEB2_CHOCR
ULP_PROTEASE domain-containing protein.
    
 0.693
R7QAV5_CHOCR
Uncharacterized protein.
   
 0.692
R7QQJ6_CHOCR
Pre-mRNA cleavage complex related.
   
 0.680
R7QBA8_CHOCR
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
    
  0.664
R7QD08_CHOCR
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
  0.639
R7QD80_CHOCR
Uncharacterized protein.
   
  0.606
R7Q829_CHOCR
Uncharacterized protein.
    
 
 0.470
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.