STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7QFZ0_CHOCRtRNA-synt_1e domain-containing protein. (112 aa)    
Predicted Functional Partners:
R7Q7X6_CHOCR
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.646
R7QCZ2_CHOCR
Methionine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.622
R7QM31_CHOCR
tRNA-binding domain-containing protein.
  
  
 0.622
R7QRP8_CHOCR
tRNA-synt_1e domain-containing protein.
 
     0.613
R7QBQ4_CHOCR
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.546
R7Q6Y5_CHOCR
Leucine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.506
R7Q5X1_CHOCR
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
     
 0.490
R7QIY8_CHOCR
tRNA-synt_1e domain-containing protein.
 
     0.490
R7QKV5_CHOCR
Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.
     
 0.481
R7QUM7_CHOCR
AA_TRNA_LIGASE_II domain-containing protein.
  
 
 0.481
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
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