STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7QLI3_CHOCRAspartate aminotransferase. (423 aa)    
Predicted Functional Partners:
R7Q985_CHOCR
Actin; Belongs to the actin family.
      
 0.734
R7QEX9_CHOCR
Actin.
      
 0.734
R7QI61_CHOCR
Actin.
      
 0.734
R7QFK1_CHOCR
4-hydroxyphenylpyruvate dioxygenase.
  
 
 0.707
R7QV80_CHOCR
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
   
 0.701
R7QD97_CHOCR
Uncharacterized protein.
    
 0.652
R7QDL4_CHOCR
Uncharacterized protein.
    
 0.651
R7Q868_CHOCR
ACT domain-containing protein.
  
 
 0.646
R7QBM2_CHOCR
Prephenate/arogenate dehydrogenase domain-containing protein.
    
 0.640
R7QL82_CHOCR
Fumarate hydratase.
   
 0.631
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
Server load: low (30%) [HD]