R7QMK3_CHOCR protein (Chondrus crispus) - STRING interaction network

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Score

R7QMK3_CHOCR

Sm-like protein, LSm6. (97 aa)

Predicted Functional Partners:

R7Q284_CHOCR

0.999

R7QGU5_CHOCR

0.999

R7QQI6_CHOCR

0.999

LSM1

0.997

LSM4

0.996

LSM4-2

0.996

R7QQD6_CHOCR

0.990

R7QU35_CHOCR

0.990

R7QKP6_CHOCR

0.983

R7QQT6_CHOCR

0.983

Your Current Organism:

Chondrus crispus

NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LSM1	LSM4	R7QB24	R7QHR4	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.965
LSM1	LSM4-2	R7QB24	R7QMG7	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.965
LSM1	R7Q284_CHOCR	R7QB24	R7Q284	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	Sm-like protein, LSm3.	0.997
LSM1	R7QGU5_CHOCR	R7QB24	R7QGU5	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.997
LSM1	R7QKP6_CHOCR	R7QB24	R7QKP6	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	Sm protein, snRNP core protein, SmF.	0.664
LSM1	R7QMK3_CHOCR	R7QB24	R7QMK3	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	Sm-like protein, LSm6.	0.997
LSM1	R7QQD6_CHOCR	R7QB24	R7QQD6	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	Small nuclear ribonucleoprotein Sm D2.	0.604
LSM1	R7QQI6_CHOCR	R7QB24	R7QQI6	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	Sm-like protein, LSm7.	0.997
LSM1	R7QQT6_CHOCR	R7QB24	R7QQT6	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	Small nuclear ribonucleoprotein Sm D3.	0.540
LSM1	R7QU35_CHOCR	R7QB24	R7QU35	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.680
LSM4	LSM1	R7QHR4	R7QB24	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	0.965
LSM4	LSM4-2	R7QHR4	R7QMG7	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.901
LSM4	R7Q284_CHOCR	R7QHR4	R7Q284	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Sm-like protein, LSm3.	0.997
LSM4	R7QGU5_CHOCR	R7QHR4	R7QGU5	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.996
LSM4	R7QKP6_CHOCR	R7QHR4	R7QKP6	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Sm protein, snRNP core protein, SmF.	0.916
LSM4	R7QMK3_CHOCR	R7QHR4	R7QMK3	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Sm-like protein, LSm6.	0.996
LSM4	R7QQD6_CHOCR	R7QHR4	R7QQD6	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Small nuclear ribonucleoprotein Sm D2.	0.927
LSM4	R7QQI6_CHOCR	R7QHR4	R7QQI6	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Sm-like protein, LSm7.	0.996
LSM4	R7QQT6_CHOCR	R7QHR4	R7QQT6	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Small nuclear ribonucleoprotein Sm D3.	0.934
LSM4	R7QU35_CHOCR	R7QHR4	R7QU35	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.924