STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7QQM0_CHOCRRIO domain-containing protein. (301 aa)    
Predicted Functional Partners:
R7QGC9_CHOCR
Uncharacterized protein.
   
 0.990
R7QKI5_CHOCR
Uncharacterized protein; Belongs to the NOB1 family.
   
 0.987
R7QJQ7_CHOCR
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
   
 0.961
R7Q4P7_CHOCR
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
    
 0.958
R7QJT8_CHOCR
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
    
 0.944
R7QMN1_CHOCR
Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.
    
 
 0.942
R7Q3M5_CHOCR
Uncharacterized protein.
   
  0.914
R7QJX4_CHOCR
RIO domain-containing protein.
   
 
 0.906
R7QUY8_CHOCR
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
    
  0.905
R7QQB5_CHOCR
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
    
 0.903
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.