STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7QSD0_CHOCRE1 enzyme family. (294 aa)    
Predicted Functional Partners:
thiG
Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
  
 
  0.684
R7QFC5_CHOCR
Uncharacterized protein.
    
 0.638
R7QGL8_CHOCR
Aminotran_5 domain-containing protein.
    
 0.638
R7Q4C4_CHOCR
Aminotran_5 domain-containing protein.
    
 0.625
R7QGB9_CHOCR
Cysteine desulfurase IscS, mitochondrial.
    
 0.625
R7QRV1_CHOCR
Aminotran_5 domain-containing protein.
    
 0.625
R7Q6E1_CHOCR
Uncharacterized protein.
 
0.551
R7Q853_CHOCR
Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation.
   
 
 0.549
R7QPH4_CHOCR
WD40-repeat containing protein.
   
    0.548
R7QCV9_CHOCR
PseudoU_synth_1 domain-containing protein.
   
  
 0.539
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
Server load: low (26%) [HD]