STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7QTH7_CHOCRCaronic anhyrase. (281 aa)    
Predicted Functional Partners:
R7Q584_CHOCR
Alpha-carbonic anhydrase domain-containing protein.
  
  
  0.949
R7QGM2_CHOCR
Carbonic anhydrase.
  
  
 
0.910
R7QFX7_CHOCR
Brix domain-containing protein.
   
    0.735
R7QK75_CHOCR
Ribosomal_L18_c domain-containing protein.
    
 
 0.697
R7Q665_CHOCR
WD_REPEATS_REGION domain-containing protein.
   
  
 0.644
S0F2V0_CHOCR
CPL domain-containing protein.
   
    0.586
R7QVG7_CHOCR
WD40-repeat containing protein.
   
    0.578
R7QF52_CHOCR
Uncharacterized protein.
   
    0.551
R7QJH4_CHOCR
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
 
 0.538
R7QN89_CHOCR
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.529
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.